J5_8PJ5_004
3D structure
- PDB id
- 8PJ5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human 48S translation initiation complex after eIF2 release prior 60S subunit joining (48S-5)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUCGCUC*GGG*UG*CCG*CGACC
- Length
- 20 nucleotides
- Bulged bases
- 8PJ5|1|A|G|126, 8PJ5|1|A|C|127
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8PJ5|1|A|G|123
8PJ5|1|A|U|124
8PJ5|1|A|C|125
8PJ5|1|A|G|126
8PJ5|1|A|C|127
8PJ5|1|A|U|128
8PJ5|1|A|C|129
*
8PJ5|1|A|G|183
8PJ5|1|A|G|184
8PJ5|1|A|G|185
*
8PJ5|1|A|U|214
8PJ5|1|A|G|215
*
8PJ5|1|A|C|310
8PJ5|1|A|C|311
8PJ5|1|A|G|312
*
8PJ5|1|A|C|337
8PJ5|1|A|G|338
8PJ5|1|A|A|339
8PJ5|1|A|C|340
8PJ5|1|A|C|341
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain C
- 40S ribosomal protein S4, X isoform
- Chain R
- 40S ribosomal protein S8
- Chain S
- 40S ribosomal protein S6
Coloring options: