J5_8Q5I_007
3D structure
- PDB id
- 8Q5I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with cephaeline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.45 Å
Loop
- Sequence
- CUUGU*AAAUAAC*GGAAUGAG*CGAGGAACAAU*AAAG
- Length
- 35 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8Q5I|1|A|C|31
8Q5I|1|A|U|32
8Q5I|1|A|U|33
8Q5I|1|A|G|34
8Q5I|1|A|U|35
*
8Q5I|1|A|A|471
8Q5I|1|A|A|472
8Q5I|1|A|A|473
8Q5I|1|A|U|474
8Q5I|1|A|A|475
8Q5I|1|A|A|476
8Q5I|1|A|C|477
*
8Q5I|1|A|G|507
8Q5I|1|A|G|508
8Q5I|1|A|A|509
8Q5I|1|A|A|510
8Q5I|1|A|U|511
8Q5I|1|A|G|512
8Q5I|1|A|A|513
8Q5I|1|A|G|514
*
8Q5I|1|A|C|534
8Q5I|1|A|G|535
8Q5I|1|A|A|536
8Q5I|1|A|G|537
8Q5I|1|A|G|538
8Q5I|1|A|A|539
8Q5I|1|A|A|540
8Q5I|1|A|C|541
8Q5I|1|A|A|542
8Q5I|1|A|A|543
8Q5I|1|A|U|544
*
8Q5I|1|A|A|590
8Q5I|1|A|A|591
8Q5I|1|A|A|592
8Q5I|1|A|G|593
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain K
- Ribosomal protein S4
- Chain Y
- Ribosomal protein S23 (S12)
- Chain f
- 40S ribosomal protein S30
Coloring options: