J5_8RCL_005
3D structure
- PDB id
- 8RCL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli paused disome complex (Non-rotated disome interface class 1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.49 Å
Loop
- Sequence
- GAAAGACC*GGA(H2U)AACA*UCG(2MA)(PSU)GUC*GGUUUAG*CGGUCC
- Length
- 37 nucleotides
- Bulged bases
- 8RCL|1|72|A|2062, 8RCL|1|72|A|2448, 8RCL|1|72|H2U|2449, 8RCL|1|72|U|2506, 8RCL|1|72|U|2585, 8RCL|1|72|U|2609
- QA status
- Modified nucleotides: H2U, 2MA, PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8RCL|1|72|G|2057
8RCL|1|72|A|2058
8RCL|1|72|A|2059
8RCL|1|72|A|2060
8RCL|1|72|G|2061
8RCL|1|72|A|2062
8RCL|1|72|C|2063
8RCL|1|72|C|2064
*
8RCL|1|72|G|2446
8RCL|1|72|G|2447
8RCL|1|72|A|2448
8RCL|1|72|H2U|2449
8RCL|1|72|A|2450
8RCL|1|72|A|2451
8RCL|1|72|C|2452
8RCL|1|72|A|2453
*
8RCL|1|72|U|2500
8RCL|1|72|C|2501
8RCL|1|72|G|2502
8RCL|1|72|2MA|2503
8RCL|1|72|PSU|2504
8RCL|1|72|G|2505
8RCL|1|72|U|2506
8RCL|1|72|C|2507
*
8RCL|1|72|G|2582
8RCL|1|72|G|2583
8RCL|1|72|U|2584
8RCL|1|72|U|2585
8RCL|1|72|U|2586
8RCL|1|72|A|2587
8RCL|1|72|G|2588
*
8RCL|1|72|C|2606
8RCL|1|72|G|2607
8RCL|1|72|G|2608
8RCL|1|72|U|2609
8RCL|1|72|C|2610
8RCL|1|72|C|2611
Current chains
- Chain 72
- 23S ribosomal RNA
Nearby chains
- Chain W
- Transfer RNA; tRNA
- Chain Y2
- Transfer RNA; tRNA
- Chain b2
- 50S ribosomal protein L2
- Chain h2
- 50S ribosomal protein L16
- Chain o2
- 50S ribosomal protein L15
- Chain p
- Nascent chain
Coloring options: