J5_8RCM_010

3D structure

PDB id

8RCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.59 Å

Loop

Sequence

CUGG*CGUG*CUUUCAG*CAGAAGAAG*CAAG

Length

28 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RCM|1|A2|C|36
8RCM|1|A2|U|37
8RCM|1|A2|G|38
8RCM|1|A2|G|39
*
8RCM|1|A2|C|403
8RCM|1|A2|G|404
8RCM|1|A2|U|405
8RCM|1|A2|G|406
*
8RCM|1|A2|C|436
8RCM|1|A2|U|437
8RCM|1|A2|U|438
8RCM|1|A2|U|439
8RCM|1|A2|C|440
8RCM|1|A2|A|441
8RCM|1|A2|G|442
*
8RCM|1|A2|C|492
8RCM|1|A2|A|493
8RCM|1|A2|G|494
8RCM|1|A2|A|495
8RCM|1|A2|A|496
8RCM|1|A2|G|497
8RCM|1|A2|A|498
8RCM|1|A2|A|499
8RCM|1|A2|G|500
*
8RCM|1|A2|C|545
8RCM|1|A2|A|546
8RCM|1|A2|A|547
8RCM|1|A2|G|548

Current chains

Chain A2

16S ribosomal RNA

Nearby chains

Chain D2

Small ribosomal subunit protein uS4

Chain L2

Small ribosomal subunit protein uS12