J5_8RCS_010

3D structure

PDB id

8RCS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.46 Å

Loop

Sequence

CUGG*CGUG*CUUUCAG*CAGAAGAAG*CAAG

Length

28 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RCS|1|A2|C|36
8RCS|1|A2|U|37
8RCS|1|A2|G|38
8RCS|1|A2|G|39
*
8RCS|1|A2|C|403
8RCS|1|A2|G|404
8RCS|1|A2|U|405
8RCS|1|A2|G|406
*
8RCS|1|A2|C|436
8RCS|1|A2|U|437
8RCS|1|A2|U|438
8RCS|1|A2|U|439
8RCS|1|A2|C|440
8RCS|1|A2|A|441
8RCS|1|A2|G|442
*
8RCS|1|A2|C|492
8RCS|1|A2|A|493
8RCS|1|A2|G|494
8RCS|1|A2|A|495
8RCS|1|A2|A|496
8RCS|1|A2|G|497
8RCS|1|A2|A|498
8RCS|1|A2|A|499
8RCS|1|A2|G|500
*
8RCS|1|A2|C|545
8RCS|1|A2|A|546
8RCS|1|A2|A|547
8RCS|1|A2|G|548

Current chains

Chain A2

16S ribosomal RNA

Nearby chains

Chain D2

Small ribosomal subunit protein uS4

Chain L2

Small ribosomal subunit protein uS12