J5_8RL2_004
3D structure
- PDB id
- 8RL2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human pre-60S - State 5
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.84 Å
Loop
- Sequence
- CG*UAAG*UUGAUCU*GAC*GGG
- Length
- 19 nucleotides
- Bulged bases
- 8RL2|1|L5|G|4291, 8RL2|1|L5|A|4292
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8RL2|1|L5|C|4199
8RL2|1|L5|G|4200
*
8RL2|1|L5|U|4232
8RL2|1|L5|A|4233
8RL2|1|L5|A|4234
8RL2|1|L5|G|4235
*
8RL2|1|L5|U|4289
8RL2|1|L5|U|4290
8RL2|1|L5|G|4291
8RL2|1|L5|A|4292
8RL2|1|L5|U|4293
8RL2|1|L5|C|4294
8RL2|1|L5|U|4295
*
8RL2|1|L5|G|4316
8RL2|1|L5|A|4317
8RL2|1|L5|C|4318
*
8RL2|1|L5|G|4329
8RL2|1|L5|G|4330
8RL2|1|L5|G|4331
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain CB
- Nucleolar GTP-binding protein 2
- Chain CH
- Ribosome biogenesis protein NSA2 homolog
- Chain CJ
- Ribosome production factor 2 homolog
- Chain CK
- Ribosome biogenesis regulatory protein homolog
- Chain LD
- 60S ribosomal protein L5
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