J5_8UJ9_004

3D structure

PDB id

8UJ9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human P state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

CUG*CGG*UCUU*AGGUAG*UGAAUG

Length

22 nucleotides

Bulged bases

8UJ9|1|L5|U|3818

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UJ9|1|L5|C|3696
8UJ9|1|L5|U|3697
8UJ9|1|L5|G|3698
*
8UJ9|1|L5|C|3752
8UJ9|1|L5|G|3753
8UJ9|1|L5|G|3754
*
8UJ9|1|L5|U|3770
8UJ9|1|L5|C|3771
8UJ9|1|L5|U|3772
8UJ9|1|L5|U|3773
*
8UJ9|1|L5|A|3775
8UJ9|1|L5|G|3776
8UJ9|1|L5|G|3777
8UJ9|1|L5|U|3778
8UJ9|1|L5|A|3779
8UJ9|1|L5|G|3780
*
8UJ9|1|L5|U|3814
8UJ9|1|L5|G|3815
8UJ9|1|L5|A|3816
8UJ9|1|L5|A|3817
8UJ9|1|L5|U|3818
8UJ9|1|L5|G|3819

Current chains

Chain L5

28S rRNA [Homo sapiens]

Nearby chains

Chain LA

60S ribosomal protein L8

Chain Ln

60S ribosomal protein L41

Chain Pt

Transfer RNA; tRNA

Chain S2

Small subunit ribosomal RNA; SSU rRNA