J5_8UTJ_002

3D structure

PDB id

8UTJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the 0 frame

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CAG*CGUAC*GGG*CA*UG

Length

15 nucleotides

Bulged bases

8UTJ|1|1|A|532, 8UTJ|1|1|U|562

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UTJ|1|1|C|531
8UTJ|1|1|A|532
8UTJ|1|1|G|533
*
8UTJ|1|1|C|560
8UTJ|1|1|G|561
8UTJ|1|1|U|562
8UTJ|1|1|A|563
8UTJ|1|1|C|564
*
8UTJ|1|1|G|577
8UTJ|1|1|G|578
8UTJ|1|1|G|579
*
8UTJ|1|1|C|1261
8UTJ|1|1|A|1262
*
8UTJ|1|1|U|2017
8UTJ|1|1|G|2018

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L4

Chain Q

50S ribosomal protein L20

Chain R

Ribosomal protein L21

Chain S

50S ribosomal protein L22

Chain b

50S ribosomal protein L32