J5_8UTJ_007

3D structure

PDB id

8UTJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the 0 frame

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CUGG*CGUG*CUUUC*GAAG*CAAG

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UTJ|1|2|C|36
8UTJ|1|2|U|37
8UTJ|1|2|G|38
8UTJ|1|2|G|39
*
8UTJ|1|2|C|403
8UTJ|1|2|G|404
8UTJ|1|2|U|405
8UTJ|1|2|G|406
*
8UTJ|1|2|C|436
8UTJ|1|2|U|437
8UTJ|1|2|U|438
8UTJ|1|2|U|439
8UTJ|1|2|C|440
*
8UTJ|1|2|G|497
8UTJ|1|2|A|498
8UTJ|1|2|A|499
8UTJ|1|2|G|500
*
8UTJ|1|2|C|545
8UTJ|1|2|A|546
8UTJ|1|2|A|547
8UTJ|1|2|G|548

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain i

30S ribosomal protein S4

Chain q

Small ribosomal subunit protein uS12