J5_8UTJ_009

3D structure

PDB id

8UTJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the 0 frame

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CAAG*CGGACGGG*CAC*GAC*GGCAG

Length

23 nucleotides

Bulged bases

8UTJ|1|2|A|109, 8UTJ|1|2|C|352

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UTJ|1|2|C|58
8UTJ|1|2|A|59
8UTJ|1|2|A|60
8UTJ|1|2|G|61
*
8UTJ|1|2|C|106
8UTJ|1|2|G|107
8UTJ|1|2|G|108
8UTJ|1|2|A|109
8UTJ|1|2|C|110
8UTJ|1|2|G|111
8UTJ|1|2|G|112
8UTJ|1|2|G|113
*
8UTJ|1|2|C|314
8UTJ|1|2|A|315
8UTJ|1|2|C|316
*
8UTJ|1|2|G|337
8UTJ|1|2|A|338
8UTJ|1|2|C|339
*
8UTJ|1|2|G|350
8UTJ|1|2|G|351
8UTJ|1|2|C|352
8UTJ|1|2|A|353
8UTJ|1|2|G|354

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain K

50S ribosomal protein L14

Chain P

Large ribosomal subunit protein bL19

Chain u

30S ribosomal protein S16

Chain y

30S ribosomal protein S20