J5_8UU6_007
3D structure
- PDB id
- 8UU6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ratcheted Listeria innocua 70S ribosome in complex with p/E-tRNA (structure II-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- UUUAC*GUUUG*CG*CG*CGGAUAAAA
- Length
- 23 nucleotides
- Bulged bases
- 8UU6|1|A|U|2109, 8UU6|1|A|G|2461, 8UU6|1|A|G|2462, 8UU6|1|A|A|2463, 8UU6|1|A|U|2464
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8UU6|1|A|U|2107
8UU6|1|A|U|2108
8UU6|1|A|U|2109
8UU6|1|A|A|2110
8UU6|1|A|C|2111
*
8UU6|1|A|G|2275
8UU6|1|A|U|2276
8UU6|1|A|U|2277
8UU6|1|A|U|2278
8UU6|1|A|G|2279
*
8UU6|1|A|C|2291
8UU6|1|A|G|2292
*
8UU6|1|A|C|2314
8UU6|1|A|G|2315
*
8UU6|1|A|C|2460
8UU6|1|A|G|2461
8UU6|1|A|G|2462
8UU6|1|A|A|2463
8UU6|1|A|U|2464
8UU6|1|A|A|2465
8UU6|1|A|A|2466
8UU6|1|A|A|2467
8UU6|1|A|A|2468
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 7
- Large ribosomal subunit protein bL35
- Chain C
- Large ribosomal subunit protein uL2
- Chain N
- Large ribosomal subunit protein uL15
- Chain Y
- Large ribosomal subunit protein bL27
- Chain Z
- Large ribosomal subunit protein bL28
- Chain x
- Transfer RNA; tRNA
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