J5_8UVR_002
3D structure
- PDB id
- 8UVR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with spectinomycin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.60A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- CUAAAC*GGGUCGUG*CGAGUAC*GGAAUCUG*UAAG
- Length
- 33 nucleotides
- Bulged bases
- 8UVR|1|1A|U|272|||A, 8UVR|1|1A|U|405
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8UVR|1|1A|C|268
8UVR|1|1A|U|269
8UVR|1|1A|A|270
8UVR|1|1A|A|271
8UVR|1|1A|A|271|||A
8UVR|1|1A|C|271|||B
*
8UVR|1|1A|G|271|||V
8UVR|1|1A|G|271|||W
8UVR|1|1A|G|271|||X
8UVR|1|1A|U|271|||Y
8UVR|1|1A|C|271|||Z
8UVR|1|1A|G|272
8UVR|1|1A|U|272|||A
8UVR|1|1A|G|272|||B
*
8UVR|1|1A|C|366
8UVR|1|1A|G|370
8UVR|1|1A|A|371
8UVR|1|1A|G|372
8UVR|1|1A|U|373
8UVR|1|1A|A|374
8UVR|1|1A|C|375
*
8UVR|1|1A|G|399
8UVR|1|1A|G|400
8UVR|1|1A|A|401
8UVR|1|1A|A|402
8UVR|1|1A|U|403
8UVR|1|1A|C|404
8UVR|1|1A|U|405
8UVR|1|1A|G|406
*
8UVR|1|1A|U|421
8UVR|1|1A|A|422
8UVR|1|1A|A|423
8UVR|1|1A|G|424
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 11
- 50S ribosomal protein L28
- Chain 1I
- 50S ribosomal protein L9
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