J5_8UVR_014

3D structure

PDB id

8UVR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with spectinomycin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.60A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

CGAG*CGUAG*CGAG*CGCAAG*CAAAG

Length

24 nucleotides

Bulged bases

8UVR|1|2A|A|652|||B

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UVR|1|2A|C|601
8UVR|1|2A|G|602
8UVR|1|2A|A|603
8UVR|1|2A|G|604
*
8UVR|1|2A|C|624
8UVR|1|2A|G|625
8UVR|1|2A|U|626
8UVR|1|2A|A|627
8UVR|1|2A|G|628
*
8UVR|1|2A|C|635
8UVR|1|2A|G|636
8UVR|1|2A|A|637
8UVR|1|2A|G|638
*
8UVR|1|2A|C|650
8UVR|1|2A|G|651
8UVR|1|2A|C|652
8UVR|1|2A|A|652|||A
8UVR|1|2A|A|652|||B
8UVR|1|2A|G|652|||C
*
8UVR|1|2A|C|652|||V
8UVR|1|2A|A|653
8UVR|1|2A|A|654
8UVR|1|2A|A|655
8UVR|1|2A|G|656

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 28

50S ribosomal protein L35

Chain 2F

50S ribosomal protein L4

Chain 2P

50S ribosomal protein L15