J5_8UX8_009

3D structure

PDB id

8UX8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the +1 mRNA reading frame

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CAAG*CGGACGGG*CAC*GAC*GGCAG

Length

23 nucleotides

Bulged bases

8UX8|1|2|A|109, 8UX8|1|2|C|352

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UX8|1|2|C|58
8UX8|1|2|A|59
8UX8|1|2|A|60
8UX8|1|2|G|61
*
8UX8|1|2|C|106
8UX8|1|2|G|107
8UX8|1|2|G|108
8UX8|1|2|A|109
8UX8|1|2|C|110
8UX8|1|2|G|111
8UX8|1|2|G|112
8UX8|1|2|G|113
*
8UX8|1|2|C|314
8UX8|1|2|A|315
8UX8|1|2|C|316
*
8UX8|1|2|G|337
8UX8|1|2|A|338
8UX8|1|2|C|339
*
8UX8|1|2|G|350
8UX8|1|2|G|351
8UX8|1|2|C|352
8UX8|1|2|A|353
8UX8|1|2|G|354

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain K

50S ribosomal protein L14

Chain P

Large ribosomal subunit protein bL19

Chain u

30S ribosomal protein S16

Chain y

30S ribosomal protein S20