J5_8UXA_005

3D structure

PDB id

8UXA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CGAA*UGUAAAC*GU*AU*ACAG

Length

19 nucleotides

Bulged bases

8UXA|1|AL|A|109, 8UXA|1|AL|C|356, 8UXA|1|AL|A|357

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UXA|1|AL|C|65
8UXA|1|AL|G|66
8UXA|1|AL|A|67
8UXA|1|AL|A|68
*
8UXA|1|AL|U|106
8UXA|1|AL|G|107
8UXA|1|AL|U|108
8UXA|1|AL|A|109
8UXA|1|AL|A|110
8UXA|1|AL|A|111
8UXA|1|AL|C|112
*
8UXA|1|AL|G|321
8UXA|1|AL|U|322
*
8UXA|1|AL|A|342
8UXA|1|AL|U|343
*
8UXA|1|AL|A|355
8UXA|1|AL|C|356
8UXA|1|AL|A|357
8UXA|1|AL|G|358

Current chains

Chain AL

Small ribosomal subunit rRNA

Nearby chains

Chain AB

Small ribosomal subunit protein mS41

Chain I

Large ribosomal subunit protein uL14m

Chain v

Small ribosomal subunit protein bS16m