J5_8UXB_008

3D structure

PDB id

8UXB (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified P/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUGG*CGUG*CUUUCAG*CAGAAGAAG*CAAG

Length

28 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UXB|1|2|C|36
8UXB|1|2|U|37
8UXB|1|2|G|38
8UXB|1|2|G|39
*
8UXB|1|2|C|403
8UXB|1|2|G|404
8UXB|1|2|U|405
8UXB|1|2|G|406
*
8UXB|1|2|C|436
8UXB|1|2|U|437
8UXB|1|2|U|438
8UXB|1|2|U|439
8UXB|1|2|C|440
8UXB|1|2|A|441
8UXB|1|2|G|442
*
8UXB|1|2|C|492
8UXB|1|2|A|493
8UXB|1|2|G|494
8UXB|1|2|A|495
8UXB|1|2|A|496
8UXB|1|2|G|497
8UXB|1|2|A|498
8UXB|1|2|A|499
8UXB|1|2|G|500
*
8UXB|1|2|C|545
8UXB|1|2|A|546
8UXB|1|2|A|547
8UXB|1|2|G|548

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain i

30S ribosomal protein S4

Chain q

30S ribosomal protein S12