J5_8UZG_009

3D structure

PDB id

8UZG (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified e*/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CAAG*CGGACGGG*CAC*GAC*GGCAG

Length

23 nucleotides

Bulged bases

8UZG|1|2|A|60, 8UZG|1|2|A|109, 8UZG|1|2|C|352

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UZG|1|2|C|58
8UZG|1|2|A|59
8UZG|1|2|A|60
8UZG|1|2|G|61
*
8UZG|1|2|C|106
8UZG|1|2|G|107
8UZG|1|2|G|108
8UZG|1|2|A|109
8UZG|1|2|C|110
8UZG|1|2|G|111
8UZG|1|2|G|112
8UZG|1|2|G|113
*
8UZG|1|2|C|314
8UZG|1|2|A|315
8UZG|1|2|C|316
*
8UZG|1|2|G|337
8UZG|1|2|A|338
8UZG|1|2|C|339
*
8UZG|1|2|G|350
8UZG|1|2|G|351
8UZG|1|2|C|352
8UZG|1|2|A|353
8UZG|1|2|G|354

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain K

50S ribosomal protein L14

Chain P

50S ribosomal protein L19

Chain u

30S ribosomal protein S16

Chain y

30S ribosomal protein S20