3D structure

PDB id
8V03 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S ribosome with unmodified P/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon
Experimental method
ELECTRON MICROSCOPY
Resolution
4 Å

Loop

Sequence
CGACUU*AGAC*GUUC*GC*GCGAAUG
Length
23 nucleotides
Bulged bases
8V03|1|1|U|1255
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8V03|1|1|C|584
8V03|1|1|G|585
8V03|1|1|A|586
8V03|1|1|C|587
8V03|1|1|U|588
8V03|1|1|U|589
*
8V03|1|1|A|668
8V03|1|1|G|669
8V03|1|1|A|670
8V03|1|1|C|671
*
8V03|1|1|G|809
8V03|1|1|U|810
8V03|1|1|U|811
8V03|1|1|C|812
*
8V03|1|1|G|1195
8V03|1|1|C|1196
*
8V03|1|1|G|1250
8V03|1|1|C|1251
8V03|1|1|G|1252
8V03|1|1|A|1253
8V03|1|1|A|1254
8V03|1|1|U|1255
8V03|1|1|G|1256

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain D
50S ribosomal protein L4
Chain L
50S ribosomal protein L15
Chain Q
50S ribosomal protein L20
Chain R
Large ribosomal subunit protein bL21
Chain e
50S ribosomal protein L35

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1771 s