J5_8V03_007

3D structure

PDB id

8V03 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified P/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CUGG*CGUG*CUUUCAG*CAGAAGAAG*CAAG

Length

28 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8V03|1|2|C|36
8V03|1|2|U|37
8V03|1|2|G|38
8V03|1|2|G|39
*
8V03|1|2|C|403
8V03|1|2|G|404
8V03|1|2|U|405
8V03|1|2|G|406
*
8V03|1|2|C|436
8V03|1|2|U|437
8V03|1|2|U|438
8V03|1|2|U|439
8V03|1|2|C|440
8V03|1|2|A|441
8V03|1|2|G|442
*
8V03|1|2|C|492
8V03|1|2|A|493
8V03|1|2|G|494
8V03|1|2|A|495
8V03|1|2|A|496
8V03|1|2|G|497
8V03|1|2|A|498
8V03|1|2|A|499
8V03|1|2|G|500
*
8V03|1|2|C|545
8V03|1|2|A|546
8V03|1|2|A|547
8V03|1|2|G|548

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain i

30S ribosomal protein S4

Chain q

Small ribosomal subunit protein uS12