J5_8V03_008

3D structure

PDB id

8V03 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified P/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CAAG*CGGACGGG*CAC*GAC*GCAG

Length

22 nucleotides

Bulged bases

8V03|1|2|A|109, 8V03|1|2|C|352

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8V03|1|2|C|58
8V03|1|2|A|59
8V03|1|2|A|60
8V03|1|2|G|61
*
8V03|1|2|C|106
8V03|1|2|G|107
8V03|1|2|G|108
8V03|1|2|A|109
8V03|1|2|C|110
8V03|1|2|G|111
8V03|1|2|G|112
8V03|1|2|G|113
*
8V03|1|2|C|314
8V03|1|2|A|315
8V03|1|2|C|316
*
8V03|1|2|G|337
8V03|1|2|A|338
8V03|1|2|C|339
*
8V03|1|2|G|351
8V03|1|2|C|352
8V03|1|2|A|353
8V03|1|2|G|354

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain K

50S ribosomal protein L14

Chain u

30S ribosomal protein S16

Chain y

30S ribosomal protein S20