J5_8V9L_002
3D structure
- PDB id
- 8V9L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Msmeg1130 (Balon) and MsmegEF-Tu(GDP) (Composite structure 6)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CUAAAC*GGGUUGUG*CGAGUAG*UGAAUCUG*UAAG
- Length
- 33 nucleotides
- Bulged bases
- 8V9L|1|A|U|318, 8V9L|1|A|U|493
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8V9L|1|A|C|269
8V9L|1|A|U|270
8V9L|1|A|A|271
8V9L|1|A|A|272
8V9L|1|A|A|273
8V9L|1|A|C|274
*
8V9L|1|A|G|312
8V9L|1|A|G|313
8V9L|1|A|G|314
8V9L|1|A|U|315
8V9L|1|A|U|316
8V9L|1|A|G|317
8V9L|1|A|U|318
8V9L|1|A|G|319
*
8V9L|1|A|C|457
8V9L|1|A|G|458
8V9L|1|A|A|459
8V9L|1|A|G|460
8V9L|1|A|U|461
8V9L|1|A|A|462
8V9L|1|A|G|463
*
8V9L|1|A|U|487
8V9L|1|A|G|488
8V9L|1|A|A|489
8V9L|1|A|A|490
8V9L|1|A|U|491
8V9L|1|A|C|492
8V9L|1|A|U|493
8V9L|1|A|G|494
*
8V9L|1|A|U|509
8V9L|1|A|A|510
8V9L|1|A|A|511
8V9L|1|A|G|512
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain H
- 50S ribosomal protein L9
- Chain Z
- Large ribosomal subunit protein bL28
Coloring options: