J5_8VKI_005
3D structure
- PDB id
- 8VKI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Mycobacterium smegmatis 50S ribosomal subunit bound to HflX:50S-HflX-C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.96 Å
Loop
- Sequence
- CGAG*CGCAG*CGAG*CGUAUC*GUGUAG
- Length
- 25 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8VKI|1|A|C|694
8VKI|1|A|G|695
8VKI|1|A|A|696
8VKI|1|A|G|697
*
8VKI|1|A|C|718
8VKI|1|A|G|719
8VKI|1|A|C|720
8VKI|1|A|A|721
8VKI|1|A|G|722
*
8VKI|1|A|C|729
8VKI|1|A|G|730
8VKI|1|A|A|731
8VKI|1|A|G|732
*
8VKI|1|A|C|744
8VKI|1|A|G|745
8VKI|1|A|U|746
8VKI|1|A|A|747
8VKI|1|A|U|748
8VKI|1|A|C|749
*
8VKI|1|A|G|766
8VKI|1|A|U|767
8VKI|1|A|G|768
8VKI|1|A|U|769
8VKI|1|A|A|770
8VKI|1|A|G|771
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain E
- 50S Ribosomal Protein L4
- Chain M
- 50S ribosomal protein L15
- Chain e
- 50S ribosomal protein L35
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