J5_8VTW_014

3D structure

PDB id

8VTW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-128 and protein Y at 2.35A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.35 Å

Loop

Sequence

CGAG*CGUAG*CGAG*CGCAAG*CAAAG

Length

24 nucleotides

Bulged bases

8VTW|1|2A|A|652|||B

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VTW|1|2A|C|601
8VTW|1|2A|G|602
8VTW|1|2A|A|603
8VTW|1|2A|G|604
*
8VTW|1|2A|C|624
8VTW|1|2A|G|625
8VTW|1|2A|U|626
8VTW|1|2A|A|627
8VTW|1|2A|G|628
*
8VTW|1|2A|C|635
8VTW|1|2A|G|636
8VTW|1|2A|A|637
8VTW|1|2A|G|638
*
8VTW|1|2A|C|650
8VTW|1|2A|G|651
8VTW|1|2A|C|652
8VTW|1|2A|A|652|||A
8VTW|1|2A|A|652|||B
8VTW|1|2A|G|652|||C
*
8VTW|1|2A|C|652|||V
8VTW|1|2A|A|653
8VTW|1|2A|A|654
8VTW|1|2A|A|655
8VTW|1|2A|G|656

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 28

50S ribosomal protein L35

Chain 2F

50S ribosomal protein L4

Chain 2P

50S ribosomal protein L15