J5_8VV4_009

3D structure

PDB id

8VV4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) in the P/P conformation on a slippery CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CAAG*CGGACGGG*CAC*GAC*GGCAG

Length

23 nucleotides

Bulged bases

8VV4|1|2|A|109, 8VV4|1|2|C|352

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VV4|1|2|C|58
8VV4|1|2|A|59
8VV4|1|2|A|60
8VV4|1|2|G|61
*
8VV4|1|2|C|106
8VV4|1|2|G|107
8VV4|1|2|G|108
8VV4|1|2|A|109
8VV4|1|2|C|110
8VV4|1|2|G|111
8VV4|1|2|G|112
8VV4|1|2|G|113
*
8VV4|1|2|C|314
8VV4|1|2|A|315
8VV4|1|2|C|316
*
8VV4|1|2|G|337
8VV4|1|2|A|338
8VV4|1|2|C|339
*
8VV4|1|2|G|350
8VV4|1|2|G|351
8VV4|1|2|C|352
8VV4|1|2|A|353
8VV4|1|2|G|354

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain K

50S ribosomal protein L14

Chain u

30S ribosomal protein S16

Chain y

30S ribosomal protein S20