J5_8VVR_008
3D structure
- PDB id
- 8VVR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Post-decoding/Post-hydrolysis state obtained from Anisomycin-treated mammalian ribosomes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CAUG*CGAAUGGC*GAG*CACAU*AAGGCAG
- Length
- 27 nucleotides
- Bulged bases
- 8VVR|1|ZA|A|92, 8VVR|1|ZA|C|472
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8VVR|1|ZA|C|53
8VVR|1|ZA|A|54
8VVR|1|ZA|U|55
8VVR|1|ZA|G|56
*
8VVR|1|ZA|C|89
8VVR|1|ZA|G|90
8VVR|1|ZA|A|91
8VVR|1|ZA|A|92
8VVR|1|ZA|U|93
8VVR|1|ZA|G|94
8VVR|1|ZA|G|95
8VVR|1|ZA|C|96
*
8VVR|1|ZA|G|434
8VVR|1|ZA|A|435
8VVR|1|ZA|G|436
*
8VVR|1|ZA|C|457
8VVR|1|ZA|A|458
8VVR|1|ZA|C|459
8VVR|1|ZA|A|460
8VVR|1|ZA|U|461
*
8VVR|1|ZA|A|468
8VVR|1|ZA|A|469
8VVR|1|ZA|G|470
8VVR|1|ZA|G|471
8VVR|1|ZA|C|472
8VVR|1|ZA|A|473
8VVR|1|ZA|G|474
Current chains
- Chain ZA
- 18S rRNA
Nearby chains
- Chain EB
- S4
- Chain GB
- eS6
- Chain HC
- eukaryotic elongation factor 1A
- Chain IB
- S8
- Chain JB
- S9
- Chain U
- L23
- Chain UA
- Transfer RNA; tRNA
- Chain YB
- S24
Coloring options: