J5_8VVR_009

3D structure

PDB id

8VVR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Post-decoding/Post-hydrolysis state obtained from Anisomycin-treated mammalian ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUCGCUC*GGG*UG*CCG*CGACC

Length

20 nucleotides

Bulged bases

8VVR|1|ZA|G|126, 8VVR|1|ZA|C|127

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVR|1|ZA|G|123
8VVR|1|ZA|U|124
8VVR|1|ZA|C|125
8VVR|1|ZA|G|126
8VVR|1|ZA|C|127
8VVR|1|ZA|U|128
8VVR|1|ZA|C|129
*
8VVR|1|ZA|G|183
8VVR|1|ZA|G|184
8VVR|1|ZA|G|185
*
8VVR|1|ZA|U|214
8VVR|1|ZA|G|215
*
8VVR|1|ZA|C|310
8VVR|1|ZA|C|311
8VVR|1|ZA|G|312
*
8VVR|1|ZA|C|337
8VVR|1|ZA|G|338
8VVR|1|ZA|A|339
8VVR|1|ZA|C|340
8VVR|1|ZA|C|341

Current chains

Chain ZA

18S rRNA

Nearby chains

Chain EB

S4

Chain GB

eS6

Chain IB

S8