J5_8W2N_008

3D structure

PDB id

8W2N (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) in the P/P conformation on a slippery CCC-C codon and Elongation Factor P bound (uL1 in the open conformation)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUGG*CGUG*CUUUCAG*CAGAAGAAG*CAAG

Length

28 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8W2N|1|2|C|36
8W2N|1|2|U|37
8W2N|1|2|G|38
8W2N|1|2|G|39
*
8W2N|1|2|C|403
8W2N|1|2|G|404
8W2N|1|2|U|405
8W2N|1|2|G|406
*
8W2N|1|2|C|436
8W2N|1|2|U|437
8W2N|1|2|U|438
8W2N|1|2|U|439
8W2N|1|2|C|440
8W2N|1|2|A|441
8W2N|1|2|G|442
*
8W2N|1|2|C|492
8W2N|1|2|A|493
8W2N|1|2|G|494
8W2N|1|2|A|495
8W2N|1|2|A|496
8W2N|1|2|G|497
8W2N|1|2|A|498
8W2N|1|2|A|499
8W2N|1|2|G|500
*
8W2N|1|2|C|545
8W2N|1|2|A|546
8W2N|1|2|A|547
8W2N|1|2|G|548

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain i

30S ribosomal protein S4

Chain q

30S ribosomal protein S12