J5_8WI7_005

3D structure

PDB id

8WI7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo- EM structure of Mycobacterium smegmatis 70S ribosome, bS1 and RafH.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CGAG*CGCAG*CGAG*CGUAUC*GUGUAG

Length

25 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8WI7|1|A|C|694
8WI7|1|A|G|695
8WI7|1|A|A|696
8WI7|1|A|G|697
*
8WI7|1|A|C|718
8WI7|1|A|G|719
8WI7|1|A|C|720
8WI7|1|A|A|721
8WI7|1|A|G|722
*
8WI7|1|A|C|729
8WI7|1|A|G|730
8WI7|1|A|A|731
8WI7|1|A|G|732
*
8WI7|1|A|C|744
8WI7|1|A|G|745
8WI7|1|A|U|746
8WI7|1|A|A|747
8WI7|1|A|U|748
8WI7|1|A|C|749
*
8WI7|1|A|G|766
8WI7|1|A|U|767
8WI7|1|A|G|768
8WI7|1|A|U|769
8WI7|1|A|A|770
8WI7|1|A|G|771

Current chains

Chain A

23S rRNA

Nearby chains

Chain 8

50S ribosomal protein L35

Chain G

50S ribosomal protein L4

Chain O

50S ribosomal protein L15