J5_8XU8_006
3D structure
- PDB id
- 8XU8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State 2c(S2c) of yeast 80S ribosome bound to compact eEF2 and 2 tRNAs during peptidyl transferation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UAGG*CGAUGAAG*UGAACG*CG*CAUG
- Length
- 24 nucleotides
- Bulged bases
- 8XU8|1|C|U|38
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8XU8|1|A|U|19
8XU8|1|A|A|20
8XU8|1|A|G|21
8XU8|1|A|G|22
*
8XU8|1|C|C|35
8XU8|1|C|G|36
8XU8|1|C|A|37
8XU8|1|C|U|38
8XU8|1|C|G|39
8XU8|1|C|A|40
8XU8|1|C|A|41
8XU8|1|C|G|42
*
8XU8|1|C|U|102
8XU8|1|C|G|103
8XU8|1|C|A|104
8XU8|1|C|A|105
8XU8|1|C|C|106
8XU8|1|C|G|107
*
8XU8|1|C|C|115
8XU8|1|C|G|116
*
8XU8|1|C|C|137
8XU8|1|C|A|138
8XU8|1|C|U|139
8XU8|1|C|G|140
Current chains
- Chain A
- 25S rRNA
- Chain C
- 5.8S rRNA
Nearby chains
- Chain P
- Large ribosomal subunit protein eL15A
- Chain Z
- Large ribosomal subunit protein uL23
- Chain j
- Large ribosomal subunit protein uL29A
- Chain l
- Large ribosomal subunit protein eL37A
- Chain n
- Large ribosomal subunit protein eL39
Coloring options: