J5_8ZFI_002
3D structure
- PDB id
- 8ZFI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome in complex with an engineered arrest peptide and trigger factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CUGG*CGUG*CUUUCAG*CAGAAGAAG*CAAG
- Length
- 28 nucleotides
- Bulged bases
- 8ZFI|1|A|G|494
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8ZFI|1|A|C|36
8ZFI|1|A|U|37
8ZFI|1|A|G|38
8ZFI|1|A|G|39
*
8ZFI|1|A|C|403
8ZFI|1|A|G|404
8ZFI|1|A|U|405
8ZFI|1|A|G|406
*
8ZFI|1|A|C|436
8ZFI|1|A|U|437
8ZFI|1|A|U|438
8ZFI|1|A|U|439
8ZFI|1|A|C|440
8ZFI|1|A|A|441
8ZFI|1|A|G|442
*
8ZFI|1|A|C|492
8ZFI|1|A|A|493
8ZFI|1|A|G|494
8ZFI|1|A|A|495
8ZFI|1|A|A|496
8ZFI|1|A|G|497
8ZFI|1|A|A|498
8ZFI|1|A|A|499
8ZFI|1|A|G|500
*
8ZFI|1|A|C|545
8ZFI|1|A|A|546
8ZFI|1|A|A|547
8ZFI|1|A|G|548
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain D
- 30S ribosomal protein S4
- Chain L
- Small ribosomal subunit protein uS12
Coloring options: