J5_9B4Z_006

3D structure

PDB id

9B4Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complex (N1-methylated 16S A1408 + arbekacin)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

CGACUU*AGAC*GUUC*GC*GCGAAUG

Length

23 nucleotides

Bulged bases

9B4Z|1|BA|U|1255

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B4Z|1|BA|C|584
9B4Z|1|BA|G|585
9B4Z|1|BA|A|586
9B4Z|1|BA|C|587
9B4Z|1|BA|U|588
9B4Z|1|BA|U|589
*
9B4Z|1|BA|A|668
9B4Z|1|BA|G|669
9B4Z|1|BA|A|670
9B4Z|1|BA|C|671
*
9B4Z|1|BA|G|809
9B4Z|1|BA|U|810
9B4Z|1|BA|U|811
9B4Z|1|BA|C|812
*
9B4Z|1|BA|G|1195
9B4Z|1|BA|C|1196
*
9B4Z|1|BA|G|1250
9B4Z|1|BA|C|1251
9B4Z|1|BA|G|1252
9B4Z|1|BA|A|1253
9B4Z|1|BA|A|1254
9B4Z|1|BA|U|1255
9B4Z|1|BA|G|1256

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B3

50S ribosomal protein L35

Chain BE

50S ribosomal protein L4

Chain BL

50S ribosomal protein L15

Chain BQ

50S ribosomal protein L20

Chain BR

50S ribosomal protein L21