J5_9B51_002

3D structure

PDB id

9B51 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complex (N1-methylated 16S A1408 + G418)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CUGG*CGUG*CUUUCAG*CAGAAGAAG*CAAG

Length

28 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B51|1|AA|C|36
9B51|1|AA|U|37
9B51|1|AA|G|38
9B51|1|AA|G|39
*
9B51|1|AA|C|403
9B51|1|AA|G|404
9B51|1|AA|U|405
9B51|1|AA|G|406
*
9B51|1|AA|C|436
9B51|1|AA|U|437
9B51|1|AA|U|438
9B51|1|AA|U|439
9B51|1|AA|C|440
9B51|1|AA|A|441
9B51|1|AA|G|442
*
9B51|1|AA|C|492
9B51|1|AA|A|493
9B51|1|AA|G|494
9B51|1|AA|A|495
9B51|1|AA|A|496
9B51|1|AA|G|497
9B51|1|AA|A|498
9B51|1|AA|A|499
9B51|1|AA|G|500
*
9B51|1|AA|C|545
9B51|1|AA|A|546
9B51|1|AA|A|547
9B51|1|AA|G|548

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AD

30S ribosomal protein S4

Chain AL

30S ribosomal protein S12