J5_9E74_001

3D structure

PDB id

9E74 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RaiA RNA from Nocardioides

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UUGCG*CUAG*UCCACGUAAC*GGAUCAC*GAAGA

Length

31 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9E74|1|A|U|18
9E74|1|A|U|19
9E74|1|A|G|20
9E74|1|A|C|21
9E74|1|A|G|22
*
9E74|1|A|C|58
9E74|1|A|U|59
9E74|1|A|A|60
9E74|1|A|G|61
*
9E74|1|A|U|87
9E74|1|A|C|88
9E74|1|A|C|89
9E74|1|A|A|90
9E74|1|A|C|91
9E74|1|A|G|92
9E74|1|A|U|93
9E74|1|A|A|94
9E74|1|A|A|95
9E74|1|A|C|96
*
9E74|1|A|G|109
9E74|1|A|G|110
9E74|1|A|A|111
9E74|1|A|U|112
9E74|1|A|C|113
9E74|1|A|A|114
9E74|1|A|C|115
*
9E74|1|A|G|231
9E74|1|A|A|232
9E74|1|A|A|233
9E74|1|A|G|234
9E74|1|A|A|235

Current chains

Chain A

RNA (249-MER)

Nearby chains