J5_9EBB_005

3D structure

PDB id

9EBB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the MPY and ribosome-tunnel occluding hibernation factors bound to the Mycobacterium tuberculosis C- 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CAAGG*CCGCAG*CGAG*CGACCCAC*GUGAAUAG

Length

31 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9EBB|1|I|C|704
9EBB|1|I|A|705
9EBB|1|I|A|706
9EBB|1|I|G|707
9EBB|1|I|G|708
*
9EBB|1|I|C|727
9EBB|1|I|C|728
9EBB|1|I|G|729
9EBB|1|I|C|730
9EBB|1|I|A|731
9EBB|1|I|G|732
*
9EBB|1|I|C|739
9EBB|1|I|G|740
9EBB|1|I|A|741
9EBB|1|I|G|742
*
9EBB|1|I|C|754
9EBB|1|I|G|755
9EBB|1|I|A|756
9EBB|1|I|C|757
9EBB|1|I|C|758
9EBB|1|I|C|759
9EBB|1|I|A|760
9EBB|1|I|C|761
*
9EBB|1|I|G|778
9EBB|1|I|U|779
9EBB|1|I|G|780
9EBB|1|I|A|781
9EBB|1|I|A|782
9EBB|1|I|U|783
9EBB|1|I|A|784
9EBB|1|I|G|785

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain 3

50S ribosomal protein L35

Chain E

50S ribosomal protein L4

Chain L

50S ribosomal protein L15