J5_9EC3_004

3D structure

PDB id

9EC3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying fMet-tRNA(fMet) and deacylated tRNA at ribosome P and E sites.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.29 Å

Loop

Sequence

CAAGG*CCGCAG*CGAG*CGACCCAC*GUGAAUAG

Length

31 nucleotides

Bulged bases

9EC3|1|I|C|757

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9EC3|1|I|C|704
9EC3|1|I|A|705
9EC3|1|I|A|706
9EC3|1|I|G|707
9EC3|1|I|G|708
*
9EC3|1|I|C|727
9EC3|1|I|C|728
9EC3|1|I|G|729
9EC3|1|I|C|730
9EC3|1|I|A|731
9EC3|1|I|G|732
*
9EC3|1|I|C|739
9EC3|1|I|G|740
9EC3|1|I|A|741
9EC3|1|I|G|742
*
9EC3|1|I|C|754
9EC3|1|I|G|755
9EC3|1|I|A|756
9EC3|1|I|C|757
9EC3|1|I|C|758
9EC3|1|I|C|759
9EC3|1|I|A|760
9EC3|1|I|C|761
*
9EC3|1|I|G|778
9EC3|1|I|U|779
9EC3|1|I|G|780
9EC3|1|I|A|781
9EC3|1|I|A|782
9EC3|1|I|U|783
9EC3|1|I|A|784
9EC3|1|I|G|785

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain 3

50S ribosomal protein L35

Chain E

50S ribosomal protein L4

Chain L

50S ribosomal protein L15