J5_9H3Y_005
3D structure
- PDB id
- 9H3Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 50S subunit precursor 50S_(L16)-
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.09 Å
Loop
- Sequence
- GAAAGACC*GGAUAACA*UCGAUGUC*GGUUUAG*CGGUCC
- Length
- 37 nucleotides
- Bulged bases
- 9H3Y|1|A|A|2448, 9H3Y|1|A|G|2505, 9H3Y|1|A|U|2609, 9H3Y|1|A|C|2610
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9H3Y|1|A|G|2057
9H3Y|1|A|A|2058
9H3Y|1|A|A|2059
9H3Y|1|A|A|2060
9H3Y|1|A|G|2061
9H3Y|1|A|A|2062
9H3Y|1|A|C|2063
9H3Y|1|A|C|2064
*
9H3Y|1|A|G|2446
9H3Y|1|A|G|2447
9H3Y|1|A|A|2448
9H3Y|1|A|U|2449
9H3Y|1|A|A|2450
9H3Y|1|A|A|2451
9H3Y|1|A|C|2452
9H3Y|1|A|A|2453
*
9H3Y|1|A|U|2500
9H3Y|1|A|C|2501
9H3Y|1|A|G|2502
9H3Y|1|A|A|2503
9H3Y|1|A|U|2504
9H3Y|1|A|G|2505
9H3Y|1|A|U|2506||A
9H3Y|1|A|C|2507
*
9H3Y|1|A|G|2582
9H3Y|1|A|G|2583
9H3Y|1|A|U|2584
9H3Y|1|A|U|2585
9H3Y|1|A|U|2586
9H3Y|1|A|A|2587
9H3Y|1|A|G|2588
*
9H3Y|1|A|C|2606
9H3Y|1|A|G|2607
9H3Y|1|A|G|2608
9H3Y|1|A|U|2609
9H3Y|1|A|C|2610
9H3Y|1|A|C|2611
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 0
- Large ribosomal subunit protein bL32
- Chain C
- Large ribosomal subunit protein uL2
- Chain D
- 50S ribosomal protein L3
- Chain E
- Large ribosomal subunit protein uL4
- Chain L
- Large ribosomal subunit protein uL15
- Chain S
- Large ribosomal subunit protein uL22
Coloring options: