J5_9HAI_001

3D structure

PDB id

9HAI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pooled 50S subunit C-CP_L2-L28 precursor states supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

3.01 Å

Loop

Sequence

CGAUGAAG*CGAAUG*CA*UAUC*GAGG

Length

24 nucleotides

Bulged bases

9HAI|1|A|U|50

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HAI|1|A|C|47
9HAI|1|A|G|48
9HAI|1|A|A|49
9HAI|1|A|U|50
9HAI|1|A|G|51
9HAI|1|A|A|52
9HAI|1|A|A|53
9HAI|1|A|G|54
*
9HAI|1|A|C|116
9HAI|1|A|G|117
9HAI|1|A|A|118
9HAI|1|A|A|119
9HAI|1|A|U|120
9HAI|1|A|G|121
*
9HAI|1|A|C|130
9HAI|1|A|A|131
*
9HAI|1|A|U|148
9HAI|1|A|A|149
9HAI|1|A|U|150
9HAI|1|A|C|151
*
9HAI|1|A|G|175
9HAI|1|A|A|176
9HAI|1|A|G|177
9HAI|1|A|G|178

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

Large ribosomal subunit protein bL34