J5_9HMW_001
3D structure
- PDB id
- 9HMW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Arabidopsis thaliana 80S ribosome OVAC mutant in complex with P- and E-site tRNAs and mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.25 Å
Loop
- Sequence
- CGAUGAAG*UGAACG*CG*CAC*GGG
- Length
- 22 nucleotides
- Bulged bases
- 9HMW|1|3|U|42
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9HMW|1|3|C|39
9HMW|1|3|G|40
9HMW|1|3|A|41
9HMW|1|3|U|42
9HMW|1|3|G|43
9HMW|1|3|A|44
9HMW|1|3|A|45
9HMW|1|3|G|46
*
9HMW|1|3|U|106
9HMW|1|3|G|107
9HMW|1|3|A|108
9HMW|1|3|A|109
9HMW|1|3|C|110
9HMW|1|3|G|111
*
9HMW|1|3|C|119
9HMW|1|3|G|120
*
9HMW|1|3|C|143
9HMW|1|3|A|144
9HMW|1|3|C|145
*
9HMW|1|A|G|18
9HMW|1|A|G|19
9HMW|1|A|G|20
Current chains
- Chain 3
- Ribosomal RNA 5.8S
- Chain A
- Ribosomal RNA 25S
Nearby chains
- Chain AY
- Large ribosomal subunit protein eL37z
- Chain BN
- Large ribosomal subunit protein uL23y
- Chain BP
- Large ribosomal subunit protein uL29x
- Chain Ea
- Large ribosomal subunit protein eL15z
Coloring options: