J5_9I89_004
3D structure
- PDB id
- 9I89 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the A2058-dimethylated Staphylococcus aureus 70S ribosome complexed with clincelin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.01 Å
Loop
- Sequence
- CGAGUU*AGAC*GUUC*GC*GAGAAUG
- Length
- 23 nucleotides
- Bulged bases
- 9I89|1|A|U|1293
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9I89|1|A|C|627
9I89|1|A|G|628
9I89|1|A|A|629
9I89|1|A|G|630
9I89|1|A|U|631
9I89|1|A|U|632
*
9I89|1|A|A|713
9I89|1|A|G|714
9I89|1|A|A|715
9I89|1|A|C|716
*
9I89|1|A|G|854
9I89|1|A|U|855
9I89|1|A|U|856
9I89|1|A|C|857
*
9I89|1|A|G|1234
9I89|1|A|C|1235
*
9I89|1|A|G|1288
9I89|1|A|A|1289
9I89|1|A|G|1290
9I89|1|A|A|1291
9I89|1|A|A|1292
9I89|1|A|U|1293
9I89|1|A|G|1294
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 8
- Large ribosomal subunit protein bL35
- Chain I
- Large ribosomal subunit protein uL4
- Chain O
- Large ribosomal subunit protein uL15
- Chain T
- Large ribosomal subunit protein bL20
- Chain U
- Large ribosomal subunit protein bL21
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