J5_9J1M_004
3D structure
- PDB id
- 9J1M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- KU13-bond Mycobacterium tuberculosis 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.33 Å
Loop
- Sequence
- CAAG*CGCAGC*GCGAG*CGACCCA*UGAAUAG
- Length
- 29 nucleotides
- Bulged bases
- 9J1M|1|A|C|758, 9J1M|1|A|A|781, 9J1M|1|A|A|782
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9J1M|1|A|C|704
9J1M|1|A|A|705
9J1M|1|A|A|706
9J1M|1|A|G|707
*
9J1M|1|A|C|728
9J1M|1|A|G|729
9J1M|1|A|C|730
9J1M|1|A|A|731
9J1M|1|A|G|732
9J1M|1|A|C|733
*
9J1M|1|A|G|738
9J1M|1|A|C|739
9J1M|1|A|G|740
9J1M|1|A|A|741
9J1M|1|A|G|742
*
9J1M|1|A|C|754
9J1M|1|A|G|755
9J1M|1|A|A|756
9J1M|1|A|C|757
9J1M|1|A|C|758
9J1M|1|A|C|759
9J1M|1|A|A|760
*
9J1M|1|A|U|779
9J1M|1|A|G|780
9J1M|1|A|A|781
9J1M|1|A|A|782
9J1M|1|A|U|783
9J1M|1|A|A|784
9J1M|1|A|G|785
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 3
- Large ribosomal subunit protein bL35
- Chain E
- Large ribosomal subunit protein uL4
- Chain L
- Large ribosomal subunit protein uL15
Coloring options: