J5_9J1M_006
3D structure
- PDB id
- 9J1M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- KU13-bond Mycobacterium tuberculosis 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.33 Å
Loop
- Sequence
- AAAAGACC*GGAUAACA*UCGAUGUC*GGUUUAG*CGGUCU
- Length
- 37 nucleotides
- Bulged bases
- 9J1M|1|A|A|2686, 9J1M|1|A|U|2687
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9J1M|1|A|A|2295
9J1M|1|A|A|2296
9J1M|1|A|A|2297
9J1M|1|A|A|2298
9J1M|1|A|G|2299
9J1M|1|A|A|2300
9J1M|1|A|C|2301
9J1M|1|A|C|2302
*
9J1M|1|A|G|2684
9J1M|1|A|G|2685
9J1M|1|A|A|2686
9J1M|1|A|U|2687
9J1M|1|A|A|2688
9J1M|1|A|A|2689
9J1M|1|A|C|2690
9J1M|1|A|A|2691
*
9J1M|1|A|U|2738
9J1M|1|A|C|2739
9J1M|1|A|G|2740
9J1M|1|A|A|2741
9J1M|1|A|U|2742
9J1M|1|A|G|2743
9J1M|1|A|U|2744
9J1M|1|A|C|2745
*
9J1M|1|A|G|2820
9J1M|1|A|G|2821
9J1M|1|A|U|2822
9J1M|1|A|U|2823
9J1M|1|A|U|2824
9J1M|1|A|A|2825
9J1M|1|A|G|2826
*
9J1M|1|A|C|2844
9J1M|1|A|G|2845
9J1M|1|A|G|2846
9J1M|1|A|U|2847
9J1M|1|A|C|2848
9J1M|1|A|U|2849
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 0
- Large ribosomal subunit protein bL32
- Chain C
- Large ribosomal subunit protein uL2
- Chain D
- Large ribosomal subunit protein uL3
- Chain E
- Large ribosomal subunit protein uL4
- Chain L
- Large ribosomal subunit protein uL15
- Chain M
- Large ribosomal subunit protein uL16
- Chain S
- Large ribosomal subunit protein uL22
- Chain u
- tRNA
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