J5_9J1M_008

3D structure

PDB id

9J1M (explore in PDB, NAKB, or RNA 3D Hub)

Description

KU13-bond Mycobacterium tuberculosis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

CUGG*CGUG*CUUUC*GAAG*CGAG

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9J1M|1|a|C|39
9J1M|1|a|U|40
9J1M|1|a|G|41
9J1M|1|a|G|42
*
9J1M|1|a|C|402
9J1M|1|a|G|403
9J1M|1|a|U|404
9J1M|1|a|G|405
*
9J1M|1|a|C|435
9J1M|1|a|U|436
9J1M|1|a|U|437
9J1M|1|a|U|438
9J1M|1|a|C|439
*
9J1M|1|a|G|488
9J1M|1|a|A|489
9J1M|1|a|A|490
9J1M|1|a|G|491
*
9J1M|1|a|C|536
9J1M|1|a|G|537
9J1M|1|a|A|538
9J1M|1|a|G|539

Current chains

Chain a

16S rRNA

Nearby chains

Chain d

Small ribosomal subunit protein uS4

Chain l

Small ribosomal subunit protein uS12