J5_9JSR_001

3D structure

PDB id

9JSR (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S precursor - Erm complex (C-I)

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CGAUGAAG*CGAAUG*CA*UAU*AGG

Length

22 nucleotides

Bulged bases

9JSR|1|A|U|50

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9JSR|1|A|C|47
9JSR|1|A|G|48
9JSR|1|A|A|49
9JSR|1|A|U|50
9JSR|1|A|G|51
9JSR|1|A|A|52
9JSR|1|A|A|53
9JSR|1|A|G|54
*
9JSR|1|A|C|116
9JSR|1|A|G|117
9JSR|1|A|A|118
9JSR|1|A|A|119
9JSR|1|A|U|120
9JSR|1|A|G|121
*
9JSR|1|A|C|130
9JSR|1|A|A|131
*
9JSR|1|A|U|148
9JSR|1|A|A|149
9JSR|1|A|U|150
*
9JSR|1|A|A|176
9JSR|1|A|G|177
9JSR|1|A|G|178

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34