J5_9K0Z_002
3D structure
- PDB id
- 9K0Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- EF-G2 bound 70S ribosome complex of M. smegmatis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- CUGG*CGUG*CUUUCAG*CAGAAGAAG*CGAG
- Length
- 28 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9K0Z|1|A|C|40
9K0Z|1|A|U|41
9K0Z|1|A|G|42
9K0Z|1|A|G|43
*
9K0Z|1|A|C|403
9K0Z|1|A|G|404
9K0Z|1|A|U|405
9K0Z|1|A|G|406
*
9K0Z|1|A|C|436
9K0Z|1|A|U|437
9K0Z|1|A|U|438
9K0Z|1|A|U|439
9K0Z|1|A|C|440
9K0Z|1|A|A|441
9K0Z|1|A|G|442
*
9K0Z|1|A|C|472
9K0Z|1|A|A|473
9K0Z|1|A|G|474
9K0Z|1|A|A|475
9K0Z|1|A|A|476
9K0Z|1|A|G|477
9K0Z|1|A|A|478
9K0Z|1|A|A|479
9K0Z|1|A|G|480
*
9K0Z|1|A|C|525
9K0Z|1|A|G|526
9K0Z|1|A|A|527
9K0Z|1|A|G|528
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain D
- Small ribosomal subunit protein uS4
- Chain L
- Small ribosomal subunit protein uS12
Coloring options: