J5_9K0Z_007

3D structure

PDB id

9K0Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

EF-G2 bound 70S ribosome complex of M. smegmatis

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

CGAGUC*GGAC*GUUC*GC*GAGAAUG

Length

23 nucleotides

Bulged bases

9K0Z|1|h|U|1370

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9K0Z|1|h|C|676
9K0Z|1|h|G|677
9K0Z|1|h|A|678
9K0Z|1|h|G|679
9K0Z|1|h|U|680
9K0Z|1|h|C|681
*
9K0Z|1|h|G|783
9K0Z|1|h|G|784
9K0Z|1|h|A|785
9K0Z|1|h|C|786
*
9K0Z|1|h|G|924
9K0Z|1|h|U|925
9K0Z|1|h|U|926
9K0Z|1|h|C|927
*
9K0Z|1|h|G|1310
9K0Z|1|h|C|1311
*
9K0Z|1|h|G|1365
9K0Z|1|h|A|1366
9K0Z|1|h|G|1367
9K0Z|1|h|A|1368
9K0Z|1|h|A|1369
9K0Z|1|h|U|1370
9K0Z|1|h|G|1371

Current chains

Chain h

23S ribosomal RNA

Nearby chains

Chain e

Large ribosomal subunit protein bL35

Chain k

Large ribosomal subunit protein uL4

Chain s

Large ribosomal subunit protein uL15

Chain x

Large ribosomal subunit protein bL20

Chain y

Large ribosomal subunit protein bL21