J5_9K0Z_008

3D structure

PDB id

9K0Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

EF-G2 bound 70S ribosome complex of M. smegmatis

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

CGAG*CGCAG*CGAG*CGUAUC*GUGUAG

Length

25 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9K0Z|1|h|C|694
9K0Z|1|h|G|695
9K0Z|1|h|A|696
9K0Z|1|h|G|697
*
9K0Z|1|h|C|718
9K0Z|1|h|G|719
9K0Z|1|h|C|720
9K0Z|1|h|A|721
9K0Z|1|h|G|722
*
9K0Z|1|h|C|729
9K0Z|1|h|G|730
9K0Z|1|h|A|731
9K0Z|1|h|G|732
*
9K0Z|1|h|C|744
9K0Z|1|h|G|745
9K0Z|1|h|U|746
9K0Z|1|h|A|747
9K0Z|1|h|U|748
9K0Z|1|h|C|749
*
9K0Z|1|h|G|766
9K0Z|1|h|U|767
9K0Z|1|h|G|768
9K0Z|1|h|U|769
9K0Z|1|h|A|770
9K0Z|1|h|G|771

Current chains

Chain h

23S ribosomal RNA

Nearby chains

Chain e

Large ribosomal subunit protein bL35

Chain k

Large ribosomal subunit protein uL4

Chain s

Large ribosomal subunit protein uL15