J5_9K0Z_010
3D structure
- PDB id
- 9K0Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- EF-G2 bound 70S ribosome complex of M. smegmatis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- AAAAGACC*GGAUAACA*UCGAUGU*GUUUAG*CGGUCU
- Length
- 35 nucleotides
- Bulged bases
- 9K0Z|1|h|A|2286, 9K0Z|1|h|A|2672, 9K0Z|1|h|U|2833
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9K0Z|1|h|A|2281
9K0Z|1|h|A|2282
9K0Z|1|h|A|2283
9K0Z|1|h|A|2284
9K0Z|1|h|G|2285
9K0Z|1|h|A|2286
9K0Z|1|h|C|2287
9K0Z|1|h|C|2288
*
9K0Z|1|h|G|2670
9K0Z|1|h|G|2671
9K0Z|1|h|A|2672
9K0Z|1|h|U|2673
9K0Z|1|h|A|2674
9K0Z|1|h|A|2675
9K0Z|1|h|C|2676
9K0Z|1|h|A|2677
*
9K0Z|1|h|U|2724
9K0Z|1|h|C|2725
9K0Z|1|h|G|2726
9K0Z|1|h|A|2727
9K0Z|1|h|U|2728
9K0Z|1|h|G|2729
9K0Z|1|h|U|2730
*
9K0Z|1|h|G|2807
9K0Z|1|h|U|2808
9K0Z|1|h|U|2809
9K0Z|1|h|U|2810
9K0Z|1|h|A|2811
9K0Z|1|h|G|2812
*
9K0Z|1|h|C|2830
9K0Z|1|h|G|2831
9K0Z|1|h|G|2832
9K0Z|1|h|U|2833
9K0Z|1|h|C|2834
9K0Z|1|h|U|2835
Current chains
- Chain h
- 23S ribosomal RNA
Nearby chains
- Chain 2
- Transfer RNA; tRNA
- Chain b
- Large ribosomal subunit protein bL32
- Chain i
- Large ribosomal subunit protein uL2
- Chain j
- Large ribosomal subunit protein uL3
- Chain k
- Large ribosomal subunit protein uL4
- Chain s
- Large ribosomal subunit protein uL15
- Chain t
- Large ribosomal subunit protein uL16
- Chain z
- Large ribosomal subunit protein uL22
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