J5_9K10_003
3D structure
- PDB id
- 9K10 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- EF-G2 bound 50S ribosome subunit complex of M. smegmatis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CCG*CGUGC*GAG*CA*UG
- Length
- 15 nucleotides
- Bulged bases
- 9K10|1|A|C|619, 9K10|1|A|U|654
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9K10|1|A|C|618
9K10|1|A|C|619
9K10|1|A|G|620
*
9K10|1|A|C|652
9K10|1|A|G|653
9K10|1|A|U|654
9K10|1|A|G|655
9K10|1|A|C|656
*
9K10|1|A|G|669
9K10|1|A|A|670
9K10|1|A|G|671
*
9K10|1|A|C|1376
9K10|1|A|A|1377
*
9K10|1|A|U|2241
9K10|1|A|G|2242
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain E
- 50S ribosomal protein L4
- Chain K
- 50S ribosomal protein L13
- Chain R
- 50S ribosomal protein L20
- Chain S
- 50S ribosomal protein L21
- Chain T
- 50S ribosomal protein L22
- Chain b
- 50S ribosomal protein L32
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