J5_9MR4_009

3D structure

PDB id

9MR4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

NAC: Ribosome nascent chain complex(Oxa1L)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

GUCGCUC*GGG*UG*CCG*CGACC

Length

20 nucleotides

Bulged bases

9MR4|1|K|G|126, 9MR4|1|K|C|127

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MR4|1|K|G|123
9MR4|1|K|U|124
9MR4|1|K|C|125
9MR4|1|K|G|126
9MR4|1|K|C|127
9MR4|1|K|U|128
9MR4|1|K|C|129
*
9MR4|1|K|G|183
9MR4|1|K|G|184
9MR4|1|K|G|185
*
9MR4|1|K|U|214
9MR4|1|K|G|215
*
9MR4|1|K|C|310
9MR4|1|K|C|311
9MR4|1|K|G|312
*
9MR4|1|K|C|337
9MR4|1|K|G|338
9MR4|1|K|A|339
9MR4|1|K|C|340
9MR4|1|K|C|341

Current chains

Chain K

18S rRNA

Nearby chains

Chain CC

40S ribosomal protein S8

Chain x

40S ribosomal protein S4

Chain z

40S ribosomal protein S6