J5_9MTP_004

3D structure

PDB id

9MTP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-N5-methylated Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.40A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.4 Å

Loop

Sequence

CGACUC*GGAC*GUUC*GC*GCGAAUG

Length

23 nucleotides

Bulged bases

9MTP|1|1A|U|1255

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MTP|1|1A|C|584
9MTP|1|1A|G|585
9MTP|1|1A|A|586
9MTP|1|1A|C|587
9MTP|1|1A|U|588
9MTP|1|1A|C|589
*
9MTP|1|1A|G|668
9MTP|1|1A|G|669
9MTP|1|1A|A|670
9MTP|1|1A|C|671
*
9MTP|1|1A|G|809
9MTP|1|1A|U|810
9MTP|1|1A|U|811
9MTP|1|1A|C|812
*
9MTP|1|1A|G|1195
9MTP|1|1A|C|1196
*
9MTP|1|1A|G|1250
9MTP|1|1A|C|1251
9MTP|1|1A|G|1252
9MTP|1|1A|A|1253
9MTP|1|1A|A|1254
9MTP|1|1A|U|1255
9MTP|1|1A|G|1256

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 18

50S ribosomal protein L35

Chain 1F

50S ribosomal protein L4

Chain 1P

50S ribosomal protein L15

Chain 1U

50S ribosomal protein L20

Chain 1V

50S ribosomal protein L21